Ach02g086691.2 May 08, 2015

Protein name	Ach02g086691.2

Alternative name	Putative lysozyme-like protein

Source	Annotation

Theoretical PI	9.18

Molecular weight	35288.3 Da

Gene name	Ach02g086691

Function

Description

Uncharacterized protein

PMID

Biological Process

Molecular Function

Cellular Component

DNA binding

GO:0003677

Pathway

KEGG

COG

KOG

3e-51	176	At1g63470
2e-61	199	At2g33620
1e-60	199	At2g45850
1e-65	212	At4g12080
2e-59	197	At4g25320

Interaction

PPIs	0 protein interacts with Ach02g086691.2
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Sequences CDS download protein download

Sequences

MEEKEILTSE	SPARFSETGS	PPLPPSFGGV	GGGMVPQVMG	TAVNMSLGGI	50
SGGGGNSSGG	DVTGKKKRGR	PRKYDSDGNL	RVSYKSPPPG	FFLSPHSSDF	100
SAKKSRGRSP	GSGNWQLLAS	LGELFADTAG	GDFTPHVVTV	NTGEDVAQKI	150
LSFSMKGPRG	ICVLSANGAV	SNVTIHQPGS	SGGLLTYEGR	LEILSLTGSF	200
TVSENGGVRS	RTGRLSVSLA	GPDGRVVGGG	IAGLLTAASP	IQIVVGSFMP	250
NGFKAHKRKH	QYEPITSPNT	VTAATPISQA	PPHGNISLTP	TSQLPSQNHG	300
EADKQNPNAT	STDSAEWNGS	ERTWAQRPSP	DINLSVPLDW	N	350

Length

341

Alternative splicing

Not at the present moment

Mutagenesis

Similar Protein

Paralog

Putative DNA-binding protein ESCAROLA	3e-048	189	Ach03g010881.1
Putative DNA-binding protein ESCAROLA	2e-057	219	Ach04g343631.1
DNA binding protein, putative	1e-048	190	Ach08g302651.1
Putative DNA-binding protein ESCAROLA	3e-055	212	Ach14g317401.2
Hypothetical protein	2e-053	206	Ach18g093181.2

GeneBank

putative lysozyme-like protein	4.68274e-139	404	XP_002277536.1
unnamed protein product	5.67692e-139	402	CBI30234.3
hypothetical protein PRUPE_ppa024471mg, partial	1.16798e-130	381	XP_007204125.1
hypothetical protein CICLE_v10012017mg	3.04498e-130	382	XP_006430321.1
uncharacterized protein LOC102617101 isoform X1	3.47413e-130	382	XP_006481910.1

Swiss Prot

Putative DNA-binding protein ESCAROLA

9.46371e-10

Q9S7C9

TrEMBL

Putative uncharacterized protein	1e-139	404	F6HKG8
Uncharacterized protein	1e-131	381	M5VVA2
Uncharacterized protein	1e-130	382	V4T1Z8
Uncharacterized protein	1e-130	381	A0A067FCS0
DNA binding protein, putative isoform 1	1e-130	381	A0A061EUM2

Arabidopsis

Predicted AT-hook DNA-binding family protein	4e-014	75.9	AT1G14490.1
AT hook motif DNA-binding family protein	7e-045	177	AT1G63470.1
AT hook motif DNA-binding family protein	5e-042	168	AT1G63480.1
Predicted AT-hook DNA-binding family protein	1e-014	77.8	AT1G76500.1
AT hook motif DNA-binding family protein	3e-052	202	AT2G33620.1

Tomato

AT-hook motif nuclear localized protein 1	1e-056	216	Solyc01g091370.2
AT-hook motif nuclear localized protein 1	4e-049	191	Solyc01g094460.2
AT-hook motif nuclear localized protein 1	6e-053	204	Solyc03g007150.2
AT-hook motif nuclear localized protein 3	4e-048	188	Solyc06g035430.2
AT-hook motif nuclear localized protein 1	2e-050	196	Solyc08g007530.2

Expression

Subcellular location

Unclear

Expression at different developmental stages of three Actinidia species

Period: 20DAP Period: 120DAP Period: 127DAP

Structure

Coils
PDB

Family & Domains

Gene3D

Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2

133-258

3.30.1330.80

Pfam

AT hook motif	65-77	PF02178
Domain of unknown function	133-253	PF03479

SUPFAM

AF0104/ALDC/Ptd012-like superfamily

132-256

SSF117856

HAMAP

PIRSF

PRINTS

Prosite

Smart

DNA binding domain with preference for A/T rich regions	65-77	SM00384
DNA binding domain with preference for A/T rich regions	103-115	SM00384

TIGRFAM

Publications

Crowhurst, R. N., A. P. Gleave, et al. (2008). Analysis of expressed sequence tags from Actinidia: applications of a cross species EST database for gene discovery in the areas of flavor, health, color and ripening. BMC Genomics 9: 351. PMID: 18655731

Fraser, L. G., G. K. Tsang, et al. (2009). A gene-rich linkage map in the dioecious species Actinidia chinensis (kiwifruit) reveals putative X/Y sex-determining chromosomes. BMC Genomics 10: 102. PMID: 19284545