Ach08g302651.1 May 08, 2015

Protein name	Ach08g302651.1

Alternative name	DNA binding protein, putative

Source	Annotation

Theoretical PI	10.07

Molecular weight	33459.9 Da

Gene name	Ach08g302651

Function

Description	Uncharacterized protein
PMID
Biological Process
Molecular Function
Cellular Component

Pathway

KEGG

COG

KOG

1e-45	158	At2g33620
4e-59	194	At2g45850
1e-54	183	At3g61310
3e-48	167	At4g12080
4e-46	160	At4g22770

Interaction

PPIs	0 protein interacts with Ach08g302651.1
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Sequences CDS download protein download

Sequences

MDRREAMALS	GSNFYMQRGI	GGSGSGPFQS	LSNPNVSFQS	NIGGGSMGST	50
LPIEPLPGVS	PHGVNVGAPT	FVPPAEPVRR	KRGRPRKYGP	DGAVSLALSP	100
ASSTPPVSVT	PTPKRGRGRP	PGTGRKQQLA	SLGEWLSGSA	GMGFTPHVIT	150
IAIGEDITQK	IMSFSQQGPR	AICILSANGS	VSTVTLRQPS	TSGGSVTYEG	200
RFEIICLSGS	YLVTDNGGPR	GRTGGLSVLL	ASPDGRVIGG	GVGGVLLAAS	250
PVQVIVGSFL	WGSSKNKAGA	GLEGAGNLDR	QTADNPAALD	STTPSQNLIP	300
TSSVGVWPGS	RPMVMQNAQV	DIDLMRE			327

Length

327

Alternative splicing

Not at the present moment

Mutagenesis

Similar Protein

Paralog

DNA binding protein, putative	3e-126	447	Ach00g107361.2
DNA binding protein, putative	3e-126	447	Ach00g107401.2
Putative DNA-binding protein ESCAROLA	2e-064	242	Ach04g343631.1
Putative DNA-binding protein ESCAROLA	3e-077	285	Ach14g189641.2
Putative DNA-binding protein ESCAROLA	6e-063	238	Ach14g317401.2

GeneBank

DNA binding protein, putative	1.98449e-124	366	XP_002511843.1
DNA-binding family protein	8.62162e-123	361	XP_002320785.1
hypothetical protein L484_017300	3.83575e-122	361	XP_010105952.1
uncharacterized protein LOC105133650	5.69878e-122	359	XP_011036035.1
uncharacterized protein LOC100265498	6.55643e-122	359	XP_002272142.1

Swiss Prot

Putative DNA-binding protein ESCAROLA

5.56546e-10

Q9S7C9

TrEMBL

DNA binding protein, putative	1e-125	366	B9RDQ4
DNA-binding family protein	1e-123	361	B9I8H7
Uncharacterized protein	1e-122	361	W9S3E4
Putative uncharacterized protein	1e-122	359	D7UC79
Uncharacterized protein	1e-122	358	A0A067K8P7

Arabidopsis

Predicted AT-hook DNA-binding family protein	4e-013	72.4	AT1G14490.1
Predicted AT-hook DNA-binding family protein	2e-011	66.6	AT1G20900.1
AT hook motif DNA-binding family protein	1e-059	226	AT1G63470.1
AT hook motif DNA-binding family protein	1e-057	220	AT1G63480.1
Predicted AT-hook DNA-binding family protein	2e-016	83.2	AT1G76500.1

Tomato

AT-hook motif nuclear localized protein 1	1e-054	210	Solyc01g091370.2
AT-hook motif nuclear localized protein 1	1e-102	369	Solyc01g094460.2
AT-hook motif nuclear localized protein 2	8e-054	207	Solyc02g038760.2
AT-hook motif nuclear localized protein 1	2e-053	206	Solyc08g007530.2
AT-hook motif nuclear localized protein 1	2e-083	305	Solyc08g008030.2

Expression

Subcellular location

Mitochondrion

Expression at different developmental stages of three Actinidia species

Period: 20DAP Period: 120DAP Period: 127DAP

Structure

Coils
PDB

Family & Domains

Gene3D

Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2

144-259

3.30.1330.80

Pfam

Domain of unknown function

144-264

PF03479

SUPFAM

AF0104/ALDC/Ptd012-like superfamily

144-261

SSF117856

HAMAP

PIRSF

PRINTS

Prosite

Smart

TIGRFAM

Publications

Crowhurst, R. N., A. P. Gleave, et al. (2008). Analysis of expressed sequence tags from Actinidia: applications of a cross species EST database for gene discovery in the areas of flavor, health, color and ripening. BMC Genomics 9: 351. PMID: 18655731

Fraser, L. G., G. K. Tsang, et al. (2009). A gene-rich linkage map in the dioecious species Actinidia chinensis (kiwifruit) reveals putative X/Y sex-determining chromosomes. BMC Genomics 10: 102. PMID: 19284545