Ach14g317401.2 May 08, 2015

Protein name	Ach14g317401.2

Alternative name	Putative DNA-binding protein ESCAROLA

Source	Annotation

Theoretical PI	9.4

Molecular weight	30829.1 Da

Gene name	Ach14g317401

Function

Description	Uncharacterized protein
PMID
Biological Process
Molecular Function
Cellular Component

Pathway

KEGG

COG

KOG

7e-72	227	At4g12080
3e-66	211	At4g22770
2e-47	165	At4g25320
3e-45	159	At5g51590
4e-45	159	At5g62260

Interaction

PPIs	0 protein interacts with Ach14g317401.2
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Sequences CDS download protein download

Sequences

MGQIPLNPCL	NERTENLNQP	TGSILGGTPQ	VGVPPFAPAP	VGALPVKKKR	50
GRPRKYGPDG	SVTKVLSPKP	ISSSAPPPVI	DFSANKRAKI	RPVGPTVKQQ	100
HRMELENSGE	WVSCSVGTNF	TPHIITVNAG	EDVTMKVISF	SQQGPCAICI	150
LSANGVISSV	TLRQPDSSGG	TLTYEGRFEI	LSLTGSFMPA	ESGGIRNRTG	200
GMSVSLASPD	GRVMGGGVAG	SLVAASPVQI	VVGSFIAGNQ	HEQKPKKQKT	250
ESVTAATPTA	AIPISSAEME	ETHGGQGPCT	STTPKTNLSF	SSFRGEN	300

Length

297

Alternative splicing

Not at the present moment

Mutagenesis

Similar Protein

Paralog

Putative DNA-binding protein ESCAROLA	5e-063	237	Ach00g089451.2
ACT domain-containing protein ACR	1e-105	379	Ach00g479701.2
Putative lysozyme-like protein	2e-055	212	Ach02g086691.2
Putative DNA-binding protein ESCAROLA	5e-061	231	Ach02g249941.1
Putative DNA-binding protein ESCAROLA	1e-062	236	Ach03g010881.1

GeneBank

uncharacterized protein LOC100244375	5.63205e-96	292	XP_002274756.1
hypothetical protein VITISV_031923	3.20704e-94	291	CAN62363.1
uncharacterized protein LOC104892414	6.19754e-90	276	XP_010676643.1
AT-hook motif nuclear-localized protein 1 isoform 2	7.18041e-90	276	XP_007040013.1
unnamed protein product	1.54714e-89	273	CBI34816.3

Swiss Prot

Putative DNA-binding protein ESCAROLA

3.77441e-07

Q9S7C9

TrEMBL

Putative uncharacterized protein	1e-94	291	A5ADV9
AT-hook motif nuclear-localized protein 1 isoform 2	3e-90	276	A0A061GBU0
Putative uncharacterized protein	3e-89	274	F6HUL3
AT-hook motif nuclear-localized protein 1 isoform 3	1e-88	272	A0A061G3R3
Uncharacterized protein	2e-88	271	M1AXN3

Arabidopsis

Predicted AT-hook DNA-binding family protein	5e-015	78.6	AT1G14490.1
AT hook motif DNA-binding family protein	7e-050	194	AT1G63470.1
AT hook motif DNA-binding family protein	6e-045	177	AT1G63480.1
Predicted AT-hook DNA-binding family protein	5e-013	72.0	AT1G76500.1
AT hook motif DNA-binding family protein	3e-052	202	AT2G33620.1

Tomato

AT-hook motif nuclear localized protein 1	5e-074	274	Solyc01g091370.2
AT-hook motif nuclear localized protein 1	2e-052	202	Solyc01g094460.2
AT-hook motif nuclear localized protein 1	7e-073	270	Solyc03g007150.2
AT-hook motif nuclear localized protein 3	9e-068	253	Solyc06g035430.2
AT-hook motif nuclear localized protein 1	7e-089	323	Solyc08g007530.2

Expression

Subcellular location

Unclear

Expression at different developmental stages of three Actinidia species

Period: 20DAP Period: 120DAP Period: 127DAP

Structure

Coils
PDB

Family & Domains

Gene3D

Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2

120-250

3.30.1330.80

Pfam

Domain of unknown function

120-240

PF03479

SUPFAM

AF0104/ALDC/Ptd012-like superfamily

119-238

SSF117856

HAMAP

PIRSF

PRINTS

Prosite

Smart

TIGRFAM

Publications

Crowhurst, R. N., A. P. Gleave, et al. (2008). Analysis of expressed sequence tags from Actinidia: applications of a cross species EST database for gene discovery in the areas of flavor, health, color and ripening. BMC Genomics 9: 351. PMID: 18655731

Fraser, L. G., G. K. Tsang, et al. (2009). A gene-rich linkage map in the dioecious species Actinidia chinensis (kiwifruit) reveals putative X/Y sex-determining chromosomes. BMC Genomics 10: 102. PMID: 19284545