Ach03g010881.1 May 08, 2015

Protein name	Ach03g010881.1

Alternative name	Putative DNA-binding protein ESCAROLA

Source	Annotation

Theoretical PI	9.56

Molecular weight	34119.4 Da

Gene name	Ach03g010881

Function

Description	Uncharacterized protein
PMID
Biological Process
Molecular Function
Cellular Component

Pathway

KEGG

COG

KOG

1e-55	186	At4g12080
3e-57	189	At4g22770
5e-61	201	At4g25320
6e-51	175	At5g51590
1e-54	185	At5g62260

Interaction

PPIs	0 protein interacts with Ach03g010881.1
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Sequences CDS download protein download

Sequences

MEGQEGINNS	YGVTPKREEA	PEIHRAPVTD	IPNQLTGSAP	PPVTPVSAAA	50
SGTEGKKKRG	RPRKYAPDGT	LSPTPISASI	PLTGDFSAWK	QGRGRPIDSF	100
KKKDKLVFET	PGEQVAYSVG	ANFTPHVITV	NAGEDVTMKV	ISFSQQGSRA	150
ICILSANGAI	SNVTLRQPNS	SGGTLTYEGR	FEILSLTGSF	MPTFSGGTKS	200
RSGGMSVSLA	GPDGRVLGGG	LAGLLVAAGP	VQVVVGSFLP	GHQQKQKQKP	250
KKQKFQRTAF	FSPTVANHNS	EEGTEGGCGG	PKPNLTPPSS	FLGDNMASPN	300
SVHVPKNLAT	ENDISLPRSE	SPRTEV			326

Length

326

Alternative splicing

Not at the present moment

Mutagenesis

Similar Protein

Paralog

ACT domain-containing protein ACR	4e-071	265	Ach00g479701.2
Putative lysozyme-like protein	1e-056	216	Ach02g086691.2
Putative DNA-binding protein ESCAROLA	1e-138	489	Ach02g249941.1
Putative DNA-binding protein ESCAROLA	6e-057	218	Ach04g343631.1
Putative DNA-binding protein ESCAROLA	1e-075	279	Ach14g317401.2

GeneBank

unnamed protein product	2.06002e-105	317	CBI24514.3
unnamed protein product	5.3557e-103	311	CDP05296.1
uncharacterized protein LOC100254941	1.94059e-101	308	XP_010662378.1
uncharacterized protein LOC102578979	9.22423e-99	300	XP_006348064.1
putative DNA-binding protein ESCAROLA	6.81172e-96	293	XP_010062017.1

Swiss Prot

Putative DNA-binding protein ESCAROLA

1.01342e-09

Q9S7C9

TrEMBL

Coffea canephora DH200=94 genomic scaffold, scaffold_15	1e-103	311	A0A068U9Z9
Putative uncharacterized protein	1e-102	308	F6HAK6
Uncharacterized protein	3e-99	300	M1D282
Uncharacterized protein	3e-96	293	A0A059DK94
Putative uncharacterized protein	3e-94	306	A5BL48

Arabidopsis

Predicted AT-hook DNA-binding family protein	5e-018	89.0	AT1G14490.1
AT hook motif DNA-binding family protein	2e-043	173	AT1G63470.1
AT hook motif DNA-binding family protein	1e-037	153	AT1G63480.1
Predicted AT-hook DNA-binding family protein	6e-016	81.6	AT1G76500.1
AT hook motif DNA-binding family protein	2e-050	196	AT2G33620.1

Tomato

AT-hook motif nuclear localized protein 1	1e-069	259	Solyc01g091370.2
AT-hook motif nuclear localized protein 1	5e-104	374	Solyc03g007150.2
AT-hook motif nuclear localized protein 3	5e-095	343	Solyc06g035430.2
AT-hook motif nuclear localized protein 1	2e-069	259	Solyc08g007530.2
AT-hook motif nuclear localized protein 13	5e-050	194	Solyc08g077030.2

Expression

Subcellular location

Unclear

Expression at different developmental stages of three Actinidia species

Period: 20DAP Period: 120DAP Period: 127DAP

Structure

Coils
PDB

Family & Domains

Gene3D

Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2

123-248

3.30.1330.80

Pfam

AT hook motif	56-68	PF02178
AT hook motif	90-96	PF02178
Domain of unknown function	123-243	PF03479

SUPFAM

AF0104/ALDC/Ptd012-like superfamily

122-246

SSF117856

HAMAP

PIRSF

PRINTS

Prosite

Smart

TIGRFAM

Publications

Crowhurst, R. N., A. P. Gleave, et al. (2008). Analysis of expressed sequence tags from Actinidia: applications of a cross species EST database for gene discovery in the areas of flavor, health, color and ripening. BMC Genomics 9: 351. PMID: 18655731

Fraser, L. G., G. K. Tsang, et al. (2009). A gene-rich linkage map in the dioecious species Actinidia chinensis (kiwifruit) reveals putative X/Y sex-determining chromosomes. BMC Genomics 10: 102. PMID: 19284545