Ach18g093181.2 May 08, 2015

Protein name	Ach18g093181.2

Alternative name	Hypothetical protein

Source	Annotation

Theoretical PI	4.75

Molecular weight	42794.8 Da

Gene name	Ach18g093181

Function

Description	Uncharacterized protein
PMID
Biological Process
Molecular Function
Cellular Component

Pathway

KEGG

COG

KOG

3e-73	234	At4g12080
1e-65	213	At4g22770
3e-51	177	At4g25320
9e-49	172	At5g51590
9e-49	172	At5g62260

Interaction

PPIs	0 protein interacts with Ach18g093181.2
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Sequences CDS download protein download

Sequences

MRTENLNQPT	GSILGGTPQV	GVPPPSAAVA	VKKKRGRPRK	YGPDGSVTKV	50
LSPKPISSSA	PSPVIDFSAG	KPVKVRPVGP	TVKQQQQHRM	ELDNLGEWVS	100
CAVGTNFTPH	IITVNAGEDV	TMKVISFSQQ	GPRAICILSA	NGVISSVTLR	150
QPDSSGGTLT	YEGRFEILSL	TGSFMPAESG	GIRNRTGGMS	VSLASPDGRV	200
MGGGVAGLLV	AASPVQIVVG	SFIAGNQHEQ	KPKKQKTESV	RAAPAAPSTA	250
AIPISNADME	ETSVSRNKPN	DINITLPGNL	FVFSVFQTLI	CVILAKSYSP	300
SPDAFDGFLH	VLQFDYTEEV	QTEEKYGDDS	EDNDSYCYDS	DGYNEDDDDN	350
GSDGVVGWDD	DEEEFDCDLE	SKIEGFIAKV	IAGWKEELLR	DKLHNYYED	400

Length

399

Alternative splicing

Not at the present moment

Mutagenesis

Similar Protein

Paralog

Putative DNA-binding protein ESCAROLA	3e-055	213	Ach00g089451.2
ACT domain-containing protein ACR	6e-102	367	Ach00g479701.2
Putative lysozyme-like protein	1e-054	210	Ach02g086691.2
Putative DNA-binding protein ESCAROLA	1e-060	230	Ach02g249941.1
Putative DNA-binding protein ESCAROLA	2e-061	233	Ach03g010881.1

GeneBank

hypothetical protein VITISV_031923	2.49678e-93	293	CAN62363.1
AT-hook motif nuclear-localized protein 1 isoform 2	1.06326e-90	282	XP_007040013.1
uncharacterized protein LOC104892414	2.5105e-90	281	XP_010676643.1
unnamed protein product	2.89938e-90	279	CBI34816.3
DNA binding protein, putative	1.94896e-89	279	XP_002509630.1

Swiss Prot

Putative DNA-binding protein ESCAROLA

6.20884e-08

Q9S7C9

TrEMBL

Putative uncharacterized protein	9e-94	293	A5ADV9
AT-hook motif nuclear-localized protein 1 isoform 2	4e-91	282	A0A061GBU0
Putative uncharacterized protein	5e-90	279	F6HUL3
DNA binding protein, putative	7e-90	279	B9RBU6
Uncharacterized protein	8e-90	278	A0A067JNW8

Arabidopsis

Predicted AT-hook DNA-binding family protein	3e-014	76.6	AT1G14490.1
AT hook motif DNA-binding family protein	2e-049	193	AT1G63470.1
AT hook motif DNA-binding family protein	3e-044	176	AT1G63480.1
Predicted AT-hook DNA-binding family protein	6e-014	75.5	AT1G76500.1
AT hook motif DNA-binding family protein	2e-054	210	AT2G33620.1

Tomato

AT-hook motif nuclear localized protein 1	1e-075	280	Solyc01g091370.2
AT-hook motif nuclear localized protein 1	4e-073	271	Solyc03g007150.2
AT-hook motif nuclear localized protein 3	1e-064	243	Solyc06g035430.2
AT-hook motif nuclear localized protein 1	6e-087	317	Solyc08g007530.2
AT-hook motif nuclear localized protein 1	3e-054	209	Solyc08g008030.2

Expression

Subcellular location

Unclear

Expression at different developmental stages of three Actinidia species

Period: 20DAP Period: 120DAP Period: 127DAP

Structure

Coils
PDB

Family & Domains

Gene3D

Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2

107-236

3.30.1330.80

Pfam

Domain of unknown function

107-227

PF03479

SUPFAM

AF0104/ALDC/Ptd012-like superfamily

106-225

SSF117856

HAMAP

PIRSF

PRINTS

Prosite

Smart

TIGRFAM

Publications

Crowhurst, R. N., A. P. Gleave, et al. (2008). Analysis of expressed sequence tags from Actinidia: applications of a cross species EST database for gene discovery in the areas of flavor, health, color and ripening. BMC Genomics 9: 351. PMID: 18655731

Fraser, L. G., G. K. Tsang, et al. (2009). A gene-rich linkage map in the dioecious species Actinidia chinensis (kiwifruit) reveals putative X/Y sex-determining chromosomes. BMC Genomics 10: 102. PMID: 19284545